[phenixbb] PDB Deposition Question

[Alexander Hirschi]

Thanks for all the replies - it turns out I was using the .mtz file
with the map coefficients.  Things are going smoothly now!


On Mon, May 24, 2010 at 8:16 PM, Mayer, Mark (NIH/NICHD) [E]
<mayerm at mail.nih.gov> wrote:
> Are you using the maps mtz file or the mtz with all data?
> ________________________________________
> From: Pavel Afonine [PAfonine at lbl.gov]
> Sent: Monday, May 24, 2010 11:11 PM
> To: PHENIX user mailing list
> Subject: Re: [phenixbb] PDB Deposition Question
>
> Hi Alex,
>
> it is strange... How you obtained the MTZ file? Can you send the output
> of this command:
>
> phenix.mtz.dump data.mtz
>
> ?
>
> Are you sure you use the MTZ file with the data and not the one
> containing map coefficients?
>
> Pavel.
>
>
>> Hi all - I refined a structure using Phenix 1.4-3 and now I need to
>> submit it to the PDB.  When I try to run sfcheck on the .mtz that
>> Phenix generated, sfcheck can't read the file.  I also tried to
>> convert the .mtz to .cns using phenix.reflection_file_converter.  This
>> time, sfcheck could "not find IOBS or FOBS in your file".  Any advice
>> would be greatly appreciated.
>>
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