[phenixbb] How to turn off mask optimization

Schubert, Carsten [PRDUS] CSCHUBER at its.jnj.com
Wed May 26 13:21:50 PDT 2010

Hi Pavel,


I'm using 1.6.1 r393. The logfile shows 10 "Mask optimization: start'
entries in 1 macrocycle total composed of rigid_body (2 zones),
individual positions and adp refinement. 


I'll try the latest built tomorrow and see if that makes a difference.





From: phenixbb-bounces at phenix-online.org
[mailto:phenixbb-bounces at phenix-online.org] On Behalf Of Pavel Afonine
Sent: Wednesday, May 26, 2010 3:57 PM
To: PHENIX user mailing list
Subject: Re: [phenixbb] How to turn off mask optimization


Hi Carsten,

It should be fast, if not then it's a bug.

main.optimize_mask = False works for me, I just tried. Which version are
you using?


On 5/26/10 12:49 PM, Schubert, Carsten [PRDUS] wrote: 


Is there a way to turn off the mask optimization step in 393? I tried
'main.optimize_mask = False' but that does not work. The program spends
a substantial amount of time in repeated mask optimizations and I am
trying to shave off a couple minutes for each run...





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