[phenixbb] phenix refinement question

Keitaro Yamashita yamashita at castor.sci.hokudai.ac.jp
Fri Nov 19 18:52:17 PST 2010

Dear Pavel Afonine

> - outliers detection and removing: available in phenix.refine, not in Refmac;

I'm very interested in this matter.
In my case, I found the following lines in phenix.refine logfile:

basic_wilson_outliers    = 53
extreme_wilson_outliers  = 84
beamstop_shadow_outliers = 49
model_based_outliers     = 16
total                    = 133

Could you tell me some references about these theories?

Especially I'm worrying about model_based_outliers.
Should I be careful about the number of this?

Thanks in advance.

K. Yamashita

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