[phenixbb] R/Rfree discrepancy Phenix vs Refmac

Pavel Afonine pafonine at lbl.gov
Fri Aug 12 08:37:14 PDT 2011

> Yes, same mtz input file
> Sabine
> On 08/12/2011 03:04 PM, Antony Oliver wrote:
>> Possibly a silly question - but did you use the same R-free 
>> reflection subset in both refinements?

"Same MTZ file" doesn't necessarily mean the program was using the same 
R-free flags. CCP4 and PHENIX use different conventions (phenix.refine 
automatically recognizes both). phenix.refine: test/work=1/0.


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