[phenixbb] how to get the sf.ent file

Nathaniel Echols nechols at lbl.gov
Thu Dec 15 08:26:34 PST 2011


On Thu, Dec 15, 2011 at 6:27 AM, Ed Pozharski <epozh001 at umaryland.edu> wrote:
> wget -O - http://www.rcsb.org/pdb/files/r<pdb-id>sf.ent.gz | gunzip >
> <pdb-id>sf.ent

Or:

phenix.fetch_pdb -x <pdb_id>

(which gives you a CIF file, but I think these must be the same thing,
just with different extensions.)

For the really impatient:

phenix.fetch_pdb --all --mtz <pdb_id>

will collect the PDB file, the FASTA sequence, and the structure
factors, and create an MTZ file with phenix.cif_as_mtz.  (This is in
the GUI too, of course.)

-Nat


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