[phenixbb] questions on refinement

Pavel Afonine pafonine at lbl.gov
Fri Feb 18 09:37:28 PST 2011


  Hi Hena,

the answer to your question:
http://phenix-online.org/pipermail/phenixbb/2011-February/005316.html

This should be available in *development* version of PHENIX, dev-673:

http://www.phenix-online.org/download/nightly_builds.cgi?show_all=1

which is not officially released.
You can do it in Coot too.

Let me know if you have any questions.

Pavel.


On 2/18/11 9:12 AM, Hena Dutta wrote:
>
> Hello,
>
> I have a question on refinement of macromolecules. I like to apply 180 
> degree rotation to the side chain of a particular residue about a 
> particular bond and see, which one (before or after applying rotation) 
> agrees well with the observed x-ray data (based on R factors and 
> electron density map). Can someone advise, what could be the best way 
> to do this? I like to do the same operation on multiple structures 
> which are already refined.
>
> Regards,
>
> hena
>

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