[phenixbb] Displaying electron density in PyMol

Tom Terwilliger terwilliger at lanl.gov
Fri Jan 7 14:15:07 PST 2011


Hi Mike,

You should be able to use

  phenix.mtz2map 

to do this, with output=xplor.  Note that you can get a complete list of jiffies like this with:

  phenix.list

All the best,
Tom T



On Jan 7, 2011, at 2:51 PM, Michael Thompson wrote:

> Hi All,
> 
> Does phenix have a utility that will allow me to produce an electron density map that can be opened in PyMol, similar to the "FFT" utility in ccp4?
> 
> Thanks for the help,
> 
> Mike Thompson
> 
> 
> 
> 
> -- 
> Michael C. Thompson
> 
> Graduate Student
> 
> Biochemistry & Molecular Biology Division
> 
> Department of Chemistry & Biochemistry
> 
> University of California, Los Angeles
> 
> miket at chem.ucla.edu
> _______________________________________________
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> phenixbb at phenix-online.org
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Thomas C. Terwilliger
Mail Stop M888
Los Alamos National Laboratory
Los Alamos, NM 87545

Tel:  505-667-0072                 email: terwilliger at LANL.gov
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