[phenixbb] Displaying electron density in PyMol

Engin Özkan eozkan at stanford.edu
Fri Jan 7 15:32:05 PST 2011


Same here on Mac i386 using the latest release 1.7.

[engin-ozkans-macbook-pro:~] eozkan% phenix.list_1.7-629
Traceback (most recent call last):
   File "/usr/local/phenix-1.7-629/phenix/phenix/command_line/list.py", 
line 12, in <module>
     listing=os.listdir(path_to_phenix)
TypeError: coercing to Unicode: need string or buffer, NoneType found


On 1/7/11 2:45 PM, Bryan Lepore wrote:
> On Fri, Jan 7, 2011 at 5:15 PM, Tom Terwilliger<terwilliger at lanl.gov>  wrote:
>> Note that you can get a complete list of
>> jiffies like this with:
>>    phenix.list
> tried a few installations, i get this :
>
> TypeError: coercing to Unicode: need string or buffer, NoneType found
>
> ... thats on Fedora or Ubuntu...
>
> -Bryan
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> phenixbb at phenix-online.org
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-- 
Engin Özkan
Post-doctoral Scholar
Laboratory of K. Christopher Garcia
Howard Hughes Medical Institute
Dept of Molecular and Cellular Physiology
279 Campus Drive, Beckman Center B173
Stanford School of Medicine
Stanford, CA 94305
ph: (650)-498-7111




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