[phenixbb] sca file & anomalous difference map: understanding the story from the scratch,
Pavel Afonine
pafonine at lbl.gov
Mon Jun 13 10:48:05 PDT 2011
Hi,
> third Q?
> i want to generate anomalous difference map using phenix.map
>
if your input data file contains anomalous fobs+ and fobs- (or iobs+ and
iobs-) then phenix.maps (as well as phenix.refine) will generate
anomalous difference map automatically. All you need to do is:
1) Run phenix.maps to create a parameter file;
2) Edit that parameter file: specify input data file and labels, PDB
file, etc;
3) Run it:
phenix.maps maps.params
This is all explained in great details here:
http://phenix-online.org/documentation/phenix_maps.htm
Alternatively, you can use PHENIX GUI to do the same thing: it is very
easy and may be a better option for someone who is uncomfortable with
running things in the command line, editing parameter files, etc.
Pavel.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20110613/c743d181/attachment.htm>
More information about the phenixbb
mailing list