[phenixbb] phenix migration

Sebastiano Pasqualato sebastiano.pasqualato at gmail.com
Thu Mar 31 03:00:11 PDT 2011

hi Nat,
thanks for the reply.
The paths changed, and indeed the gui complains that it can't find files, but overall the 'import' procedure worked nicely and I can go on with the work on the same project.
Thanks a lot.

On Mar 30, 2011, at 10:18 PM, Nathaniel Echols wrote:

> On Wed, Mar 30, 2011 at 8:35 AM, Xtal_bb
> <sebastiano.pasqualato at gmail.com> wrote:
>> I have just got a brand new iMac, to replace my MacBook, in which I used to
>> run phenix.
>> I have installed phenix in the new iMac, and copied the directory with all
>> the files of my previous runs.
>> However, what should I migrate to have the projects and previous work
>> recognized by the fresh install?
> Did the file paths change, or are they identical to the old system?
> If the latter, then all you need to do is copy the directory ~/.phenix
> from the laptop to the iMac, and it should be happy.  If you did move
> directories around, you need to import the project directories into a
> new database.  To do this, select "Import project" from the "File"
> menu, and pick a project directory - do this for each one.  It will
> rewrite *some* paths to reflect the move, but is a little inconsistent
> at the moment - this will be addressed very soon (along with moving
> project directories on the same computer).  I would recommend
> upgrading to the newest nightly build, since I've forgotten when
> exactly some of these features were added.
> -Nat

Sebastiano Pasqualato, PhD
Crystallography Unit
Cogentech - Consortium for Genomic Technologies
via Adamello, 16
20139 - Milano

tel +39 02 9437 5172
fax +39 02 9437 5990

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