[phenixbb] Molecule and maps will not load into coot from Phenix 1.7.1-743

[Jobichen Chacko]

Dear Nat,
Any progress in this matter. To add, do you have any version of Phenix
which is working perfectly (the communication of Phenix with pymol and
coot) in ubuntu system in you lab?
Jobi

On Tue, Nov 1, 2011 at 5:08 PM, Jobichen Chacko <jobichenc at gmail.com> wrote:
> Dear Nat,
> Just to add when I try open the files in pymol, it doesnot open up and
> show this output.
>
> /usr/local/phenix-1.7.1-743/build/intel-linux-2.6-x86_64/base/bin/python2.7:
> No module named pymol
>
> Jobi
>
>
> On Tue, Nov 1, 2011 at 10:58 AM, Jobichen Chacko <jobichenc at gmail.com> wrote:
>> Dear Nat,
>> I installed the the coot version you sent to me. Still not working.
>> jobi
>>
>> On Tue, Nov 1, 2011 at 10:43 AM, Nathaniel Echols <nechols at lbl.gov> wrote:
>>> On Mon, Oct 31, 2011 at 7:34 PM, Jobichen Chacko <jobichenc at gmail.com> wrote:
>>>> Dear Nat,
>>>> Thank you for your help.
>>>> Please see the attached output after running coot_test.py
>>>> I will also try to install the coot version you send to me.
>>>> Jobi
>>>> ...
>>>> 'import site' failed; use -v for traceback
>>>
>>> Wow, that's way more broken than I was expecting.  I think this means
>>> a library conflict, but I've only come across this error on Mac.  Can
>>> you try one more thing?
>>>
>>> export PYTHONVERBOSE=1
>>> coot --script coot_test.py
>>>
>>> (If you're using csh or tcsh as your shell, the first line should be
>>> "setenv PYTHONVERBOSE 1" instead.)
>>>
>>> -Nat
>>> _______________________________________________
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>>> phenixbb at phenix-online.org
>>> http://phenix-online.org/mailman/listinfo/phenixbb
>>>
>>
>