[phenixbb] How to reduce clashscore value

CelinaSocek oceanlinerth at hotmail.com
Thu Nov 17 22:08:47 PST 2011

Hi all,
I'm now using phenix to refine a small protein about 300 residues long. The resolution of my data is about 2.9 angstrom. Currently I got a refined model with good R-factors about 23/26, RMSD very reasonable and no Ramanchandran outliers. However,  I found that the clashscore is extremely high: 63!! And rotamer outliers are also a lot: 8.5%. I wonder, what kind of stretagy I can use to reduce this? Thank you very much!
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20111118/03e3eafa/attachment.htm>

More information about the phenixbb mailing list