[phenixbb] test_hhr

Alexander Batyuk batyuk at bioc.uzh.ch
Mon Nov 21 08:59:15 PST 2011



Dear Tom,

Thanks for your reply. Sorry for the trouble - it was a false alarm. Today all the tests worked fine, perhaps the problem was with the server on the other side yesterday.

Best wishes,

Alex


> Hi Alex,
> 
> One thing to check is whether this is simply a problem in fetching files
> as you mention.  You can try setting your proxy with something like:
> 
> setenv HTTP_PROXY proxyout.mydomain.edu:8080
> 
> where you would change "mydomain.edu" to your domain.
> 
> If this is the only test that fails, I would otherwise not worry about it
> (it would just mean that you cannot run mr_rosetta simply starting from an
> hhr file, you would have to download files yourself, and edit them for
> example with phenix.sculptor).
> 
> All the best,
> Tom T
> 
> 
> 
>>> Dear all,
>>> 
>>> The phenix_regression.wizards.test_command_line_rosetta_quick_tests
>>> command hangs at the test_hhr step in phenix-dev-910 on Mac OS X 10.6.8.
>>> 
>>> What could be the reason for that? What kind of log files should I post?
>>> The firewall allowed to fetch files from the net.
>>> 
>>> Best wishes,
>>> 
>>> Alex
>>> 
>>> 
>>> 
>>> --
>>> Alex Batyuk
>>> The Plueckthun Lab
>>> www.bioc.uzh.ch/plueckthun
>>> _______________________________________________
>>> phenixbb mailing list
>>> phenixbb at phenix-online.org
>>> http://phenix-online.org/mailman/listinfo/phenixbb
>>> 
> 
> _______________________________________________
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--
Alex Batyuk
The Plueckthun Lab
www.bioc.uzh.ch/plueckthun



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