[phenixbb] real space correlation

[Ralf Grosse-Kunstleve]

Hi Jerome,
Run phenix.real_space_correlation without argument for usage instructions.
It expects a parameter file on the command line (not a PDB file).
Ralf


On Thu, Jan 19, 2012 at 12:46 PM, Jerome Nwachukwu <JNwachuk at scripps.edu>wrote:

> Hi:
> I am trying to run phenix.real_space_correlation from the command line and
> received the following error message. Is there a specific syntax i should
> use?
>
> Thank you,
> -Jerome
>
>
> Syntax error: expected "=", found "Date" (file "3_refine_001.pdb", line 1)
> Traceback (most recent call last):
>  File
> "/usr/local/phenix-1.7.1-743/cctbx_project/mmtbx/command_line/real_space_correlation.py",
> line 9, in <module>
>    command_name = "phenix.real_space_correlation")
>  File
> "/usr/local/phenix-1.7.1-743/cctbx_project/mmtbx/real_space_correlation.py",
> line 332, in cmd_run
>    track_unused_definitions = True)
>  File "/usr/local/phenix-1.7.1-743/cctbx_project/libtbx/phil/__init__.py",
> line 1718, in fetch
>    assert source.name == self.name
> AttributeError: 'NoneType' object has no attribute 'name'
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