[phenixbb] phenix error

Filip YABUKARSKI fyabukar at embl.fr
Mon Jul 16 05:34:57 PDT 2012


Dear phenix developers/users,

I am using the phenix.refine and getting the error message:

Traceback (most recent call last):
   File 
"/softdist/exp/pxsoft/phenix/v1.7.3-928/redhate4-x86_64/phenix-1.7.3-928/phenix/wxGUI2/Runtime.py", 
line 215, in OnComplete
     self.handle_complete_event(event)
   File 
"/softdist/exp/pxsoft/phenix/v1.7.3-928/redhate4-x86_64/phenix-1.7.3-928/phenix/wxGUI2/Programs/Refine/Output.py", 
line 130, in handle_complete_event
     refine_result = result)
   File 
"/softdist/exp/pxsoft/phenix/v1.7.3-928/redhate4-x86_64/phenix-1.7.3-928/phenix/wxGUI2/Programs/Refine/Output.py", 
line 180, in add_result_tabs
     self.add_validation_pages(refine_result)
   File 
"/softdist/exp/pxsoft/phenix/v1.7.3-928/redhate4-x86_64/phenix-1.7.3-928/phenix/wxGUI2/Programs/Validation/Results.py", 
line 57, in add_validation_pages
     seq_info=seq_info)
   File 
"/softdist/exp/pxsoft/phenix/v1.7.3-928/redhate4-x86_64/phenix-1.7.3-928/phenix/wxGUI2/Programs/Validation/Sequence.py", 
line 13, in __init__
     Windows.AppPanel.__init__(self, parent)
   File 
"/softdist/exp/pxsoft/phenix/v1.7.3-928/redhate4-x86_64/phenix-1.7.3-928/phenix/wxGUI2/Windows.py", 
line 518, in __init__
     WidgetArea.__init__(self, parent)
   File 
"/softdist/exp/pxsoft/phenix/v1.7.3-928/redhate4-x86_64/phenix-1.7.3-928/phenix/wxGUI2/Windows.py", 
line 479, in __init__
     self.DisplayWidgets()
   File 
"/softdist/exp/pxsoft/phenix/v1.7.3-928/redhate4-x86_64/phenix-1.7.3-928/phenix/wxGUI2/Programs/Validation/Sequence.py", 
line 62, in DisplayWidgets
     table_data = self.seq_info.get_table_data()
   File 
"/softdist/exp/pxsoft/phenix/v1.7.3-928/redhate4-x86_64/phenix-1.7.3-928/cctbx_project/mmtbx/validation/sequence.py", 
line 320, in get_table_data
     table.extend(c.get_outliers_table())
TypeError: 'NoneType' object is not iterable

I started 2 days ago, was running just fine last week. What should  I 
do? Thanks in advance

Filip



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