[phenixbb] How to run normal mode analysis under command mode?

fn1 at rice.edu fn1 at rice.edu
Sun Jun 10 17:14:05 PDT 2012


i'll try this. Thank you!

Quoting Nathaniel Echols <nechols at lbl.gov>:

> On Sun, Jun 10, 2012 at 4:21 PM,  <fn1 at rice.edu> wrote:
>> I'd like to perturb my model with normal mode analysis. Does phenix have a
>> way to do this?
>
> Technically yes, but the options are whatever Phaser offers in
> command-line mode (i.e. using CCP4-style keywords) - see here:
>
> http://www.phaser.cimr.cam.ac.uk/index.php/Keyword_Example_Scripts#Normal_Mode_Analysis
>
> We could certainly make this easier to run in Phenix, there just
> hasn't been much demand.
>
> -Nat
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