[phenixbb] cif_as_mtz assertion error

Nathaniel Echols nechols at lbl.gov
Wed Jun 13 07:59:00 PDT 2012


On Wed, Jun 13, 2012 at 7:36 AM, Eric Williams <ericwilliams at pobox.com> wrote:
> I'm trying to run phenix.cif_as_mtz on a large number of PDB entries, and
> several entries give me an assertion error. The example below is from 8icz,
> but the error always seems to be the same.

This is a bug (which one of us will fix ASAP), but if you omit the
--use-model argument, it should avoid the step that's crashing.  I
haven't come across too many entries in the PDB that actually require
this, especially among newer structures.

-Nat


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