[phenixbb] R-factor calculation

[Abhinav Kumar]

Thanks again Pavel.
Abhinav

JCSG at SSRL, SLAC
(650) 926-2992

On 06/20/2012 01:09 PM, Pavel Afonine wrote:
> Hi Abhinav,
>
> just type
>
> phenix.model_vs_data
>
> without arguments and it will print some hints. This works for most 
> command line tools, but I agree consistency would be helpful.
>
> Pavel
>
> On 6/20/12 1:06 PM, Abhinav Kumar wrote:
>> Thanks Pavel. It works.
>>
>> I earlier tried "high_resolution 2.0" which didn't work since I 
>> missed the '=' sign.
>> Maybe it's useful to print out options/examples. Currently, 
>> phenix.model_vs_data --help or (-h)  gives
>> Sorry: No reflection file found.
>>
>> I am using phenix-1.7.3-928 version.
>>
>> Abhinav
>>
>> JCSG at SSRL, SLAC
>> (650) 926-2992
>>
>> On 06/20/2012 12:39 PM, Pavel Afonine wrote:
>>> Hi Abhinav,
>>>
>>>> Is it possible to specify a different high resolution cutoff (than
>>>> what's in data file) in phenix.model_vs_data for R-factors calculation?
>>> yes:
>>>
>>> phenix.model_vs_data model.pdb data.mtz high_resolution=2.5
>>>
>>> Pavel
>>>
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>>> phenixbb at phenix-online.org
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>>
>>
>>
>>
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>


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