[phenixbb] Run time error while refining
ramssb17 at gmail.com
Fri Jun 22 10:04:10 PDT 2012
Thanks a lot. It worked fine after turning off rotamer outlier correction
and sidechain rotamer consistency in the torsion NCS options.
On Fri, Jun 22, 2012 at 9:22 AM, Jeff Headd <jjheadd at lbl.gov> wrote:
> Hi Subhani,
> Are you using torsion NCS restraints? If so, the problem is the rotamer
> outlier/consistency methods. We are aware of the problem, and are working
> on a fix. In the meantime, if you turn off rotamer outlier correction and
> sidechain rotamer consistency in the torsion NCS options, that should avoid
> the problem with the current version of Phenix.
> On Fri, Jun 22, 2012 at 7:02 AM, Subhani Bandara <ramssb17 at gmail.com>wrote:
>> Hi everyone,
>> I got the following error message while running refinement in mac, using
>> PHENIX-1.8-1069. This occured when refined after editing Ramachandran
>> outliers in coot, without applying Ramachandran restraints. Not sure wether
>> it has something to do with this.
>> RuntimeError : Estimated memory allocation for cubicles exceeds
>> This may be due to unreasonable parameters:
>> Any suggestions!
>> phenixbb mailing list
>> phenixbb at phenix-online.org
> phenixbb mailing list
> phenixbb at phenix-online.org
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