[phenixbb] SA-OMIT map/omit regions

Qiang Chen chen at red.dfci.harvard.edu
Mon Mar 5 09:03:22 PST 2012


HI all,

I want to use phenix.autobuild to calculate SA-OMIT map. BY default, it
will be seperated into 16 regions. How could I  set a different number of
omit regions? Is there any difference of the final omit map by setting
different regions?

The phenix.autobuild manual says:
If you are calculating an omit map, then use nproc=5 * number of omit
regions (i.e., up to 100 or more, depending on how many processors you
have). Does the * mean to use regions number to multiply 5?

If my computer have 16 processors and I want to use 48 regions, so my
command should be this: nproc=240.  Am I right?

Thank you!





The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.



More information about the phenixbb mailing list