[phenixbb] Phenix Rosetta install

Felipe Trajtenberg felipet at pasteur.edu.uy
Thu Dec 18 04:36:08 PST 2014


Dear all,

I am trying to build the hybrid installation between Rosetta and Phenix 
using the rosetta.build_phenix_interface command

Phenix version: phenix-1.9-1692
Rosetta version: rosetta_2014.35.57232

I have no problem in compiling rosetta alone but when I try to build the 
hybrid system I get the following error:

False
scons: Reading SConscript files ...
Running versioning script ... Done. (0.0 seconds)
Could not find platform independent libraries <prefix>
Could not find platform dependent libraries <exec_prefix>
Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>]
ImportError: No module named site
CalledProcessError: Command '['./update_options.sh']' returned non-zero 
exit status 1:
   File 
"/home/Xtal/Rosetta_phenix/rosetta_2014.35.57232_bundle/main/source/SConstruct", 
line 172:
     main()
   File 
"/home/Xtal/Rosetta_phenix/rosetta_2014.35.57232_bundle/main/source/SConstruct", 
line 163:
     SConscript("SConscript", "build")
   File 
"/home/Xtal/Rosetta_phenix/rosetta_2014.35.57232_bundle/main/source/external/scons-local/scons-local-2.0.1/SCons/Script/SConscript.py", 
line 614:
     return method(*args, **kw)
   File 
"/home/Xtal/Rosetta_phenix/rosetta_2014.35.57232_bundle/main/source/external/scons-local/scons-local-2.0.1/SCons/Script/SConscript.py", 
line 551:
     return _SConscript(self.fs, *files, **subst_kw)
   File 
"/home/Xtal/Rosetta_phenix/rosetta_2014.35.57232_bundle/main/source/external/scons-local/scons-local-2.0.1/SCons/Script/SConscript.py", 
line 260:
     exec _file_ in call_stack[-1].globals
   File 
"/home/Xtal/Rosetta_phenix/rosetta_2014.35.57232_bundle/main/source/SConscript", 
line 28:
     subprocess.check_call(["./update_options.sh"])
   File 
"/home/Xtal/Phenix/phenix-1.9-1692/build/intel-linux-2.6-x86_64/base/lib/python2.7/subprocess.py", 
line 540:
     raise CalledProcessError(retcode, cmd)

thanks in advance

Felipe


More information about the phenixbb mailing list