[phenixbb] Option for renumber the pdb

Jeffrey, Philip D. pjeffrey at princeton.edu
Thu Feb 27 00:04:56 PST 2014

Both CCP4's PDBSET and COOT should do what you want (i.e. offset the numbering by 250)

Phil Jeffrey

From: phenixbb-bounces at phenix-online.org [phenixbb-bounces at phenix-online.org] on behalf of Rojan Shrestha [rojan at riken.jp]
Sent: Thursday, February 27, 2014 12:21 AM
To: PHENIX user mailing list
Subject: [phenixbb] Option for renumber the pdb


I have found the program phenix.pdbtools. Maybe, it can renumber residues of pdb. I have found the options renumber_residues options but I am unable to see the options for starting residues.

I have pdb starts from 1 and want to renumber 1 into 250. Can somebody tell me how to put the option for starting residue?


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