[phenixbb] phenix rosetta refine

Andreas Förster docandreas at gmail.com
Wed Nov 26 08:18:28 PST 2014

Dear all,

I'm trying to get phenix.rosetta_refine to run.  I think it's all set up 
properly, with Rosetta 3.5 and Phenix 1810 on RHEL 6.3 64bit.


phenix.rosetta_refine model.pdb data.mtz nproc=48 protocol=full > log&

fails with the following error in log:

End of input processing
Sorry: The RosettaScripts executable could not be located.  Please add 
the appropriate directory to your PATH environment variable, or set the 
variable ROSETTA_BIN to point to it.

To me it seems things are defined correctly:

andreas at csbstereo in phenix: echo $ROSETTA_BIN

andreas at csbstereo in phenix: ls $ROSETTA_BIN | grep scripts

andreas at csbstereo in phenix: ll $ROSETTA_BIN/rosetta_scripts.linuxgccrelease
lrwxrwxrwx 1 csbadmin csb 93 Oct  9  2013 

Any idea of what's wrong would be greatly appreciated.


                   Andreas Förster
        X-ray Crystallography Facility Manager
            Centre for Structural Biology
               Imperial College London

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