[phenixbb] phenix rosetta refine
ivanov at embl.fr
Wed Nov 26 10:07:56 PST 2014
I got the same errors running rosetta in Phneix. It took me lots of time
to make it run. I had to change the version of Phénix.
I hope it helped.
On 2014-11-26 17:18, Andreas Förster wrote:
> Dear all,
> I'm trying to get phenix.rosetta_refine to run. I think it's all set
> up properly, with Rosetta 3.5 and Phenix 1810 on RHEL 6.3 64bit.
> phenix.rosetta_refine model.pdb data.mtz nproc=48 protocol=full > log&
> fails with the following error in log:
> End of input processing
> Sorry: The RosettaScripts executable could not be located. Please add
> the appropriate directory to your PATH environment variable, or set
> the variable ROSETTA_BIN to point to it.
> To me it seems things are defined correctly:
> andreas at csbstereo in phenix: echo $ROSETTA_BIN
> andreas at csbstereo in phenix: ls $ROSETTA_BIN | grep scripts
> andreas at csbstereo in phenix: ll
> lrwxrwxrwx 1 csbadmin csb 93 Oct 9 2013
> Any idea of what's wrong would be greatly appreciated.
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