[phenixbb] symmetry file for Phenix merging statistics

Xiao Lei xiaoleiusc at gmail.com
Mon Aug 3 07:42:34 PDT 2015


Hi Pavel,

Thanks for your information. I tried it without giving the symmetry file
and I failed with an error message immediately after I click "run".  It
says "Phenix error: missing unit cell information".

Xiao

On Sat, Aug 1, 2015 at 5:27 PM, Pavel Afonine <pafonine at lbl.gov> wrote:

> Hi Xiao,
>
> if you run phenix.merging_statistics without giving it arguments it will
> print out available parameters that you can change. Among them are
> unit_cell and space_group.
>
> I'm guessing you can define them just like this
>
> unit_cell="10,20,30,90,90,90"
> space_group="P212121"
>
> Pavel
>
>
> On 7/30/15 16:56, Xiao Lei wrote:
>
>> Hi Phenixbb members,
>>
>> I am trying to use "phenix merging statistics" tool, and I have an
>> unmerged sca file from HKL2000,  because the unmerged HKL2000 output does
>> not have unit cell information, so I also need to input a symmetry file,
>> how can I find the symmetry file? Is there a way to generate a symmetry
>> file?
>>
>> Thanks ahead.
>>
>> Xiao
>>
>
>
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