[phenixbb] fedora 22 phenix 1.9 installation

Justin Lecher j.lecher at fz-juelich.de
Wed Aug 5 09:20:35 PDT 2015


On 05/08/15 17:48, Agnieszka Kiliszek wrote:
> Dear All,
> 
> I want to install new phenix 1.9 but I got error:
> =========================================================================
>                       PHENIX Installation
> 
>                       version: 1.9
>                   release tag: 1692
>                  machine type: intel-linux-4.1.3-200.fc22.x86_64-x86_64
>           source machine type: intel-linux-4.1.3-200.fc22.x86_64-x86_64
>                    OS version: linux
>                    user shell: /bin/bash
>                   destination: /usr/local
> =========================================================================
> 
> =============================== ERROR ===================================
>   intel-linux-4.1.3-200.fc22.x86_64-x86_64 is not a supported platform,
> installation aborted
> use the --try-unsupported option to attempt installation on this platform
>         use the --no-gui option for a core PHENIX installation
> =============================== ERROR =======================
> 
> It looks like I have double x86_64 in the machine type and it doesn't want to
> install phenix.
> 
> Using --try-unsupported gives me these:
> 
> 
> ~/phenix-installer-1.9-1692/bundles/bundle-1.9-1692-intel-linux-4.1.3-200.fc22.x86_64-x86_64.tar.gz
> 
> neither source nor binary available, exiting installation.
> 
> In these folder I have file
> bundle-1.9-1692-intel-linux-4.1.3-200.fc22.x86_64.tar.gz
> 
> so I have changed name to
> bundle-1.9-1692-intel-linux-4.1.3-200.fc22.x86_64-x86_64.tar.gz
> 
> but again got error
> 
> finding installed versions
> finding binary versions
> cat: build/intel-linux-4.1.3-200.fc22.x86_64-x86_64/version: No such file or
> directory
> no pre-existing binary components detected
> installing new binary package
> configuring PHENIX components
> 
> I checked log and got these:
> 
> /home/gusia/programy/phenix-installer-1.9-1692/bin/install-from-binary: line
> 359:
> /usr/local/phenix-1.9-1692/build/intel-linux-4.1.3-200.fc22.x86_64-x86_64/base/bin/python:
> No such file or directory
> 
> What can I do to install phenix?
> 
> Agnieszka

hi Agnieszka,

edit "bin/machine_type" in the unpacked phenix and write the following in:

#!${EPREFIX}/bin/sh
echo intel-linux-2.6-x86_64
exit 0

Then restart the installer.

Justin



-- 
Justin Lecher
Institute of Complex Systems
ICS-6 Structural Biochemistry
Research Centre Juelich
52425 Juelich, Germany
phone: +49 2461 61 2117


-------------- next part --------------
A non-text attachment was scrubbed...
Name: smime.p7s
Type: application/pkcs7-signature
Size: 5103 bytes
Desc: S/MIME Cryptographic Signature
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20150805/07e27c11/attachment.p7s>


More information about the phenixbb mailing list