[phenixbb] planarity between atoms of neighboring residues

Oleg Sobolev osobolev at lbl.gov
Wed Aug 19 09:36:58 PDT 2015


Dear Agnieszka,

You may try the following:

chain A and (resid 1 and (name C5' or name C' or name O')) or (resid 2 and
name N1')

Hope this works.

Best regards,
Oleg Sobolev.

On Wed, Aug 19, 2015 at 8:34 AM, Agnieszka Kiliszek <kiliszek at ibch.poznan.pl
> wrote:

> Dear All,
>
> I would like to add restrains between two residues. I was trying to use
> geometry restrains planarity but I don't know how to select atoms from two
> different residues.
>
>
> I mean, I have:
>
> chain A resid 1 atoms: C5' C' and O1'
> chain A resid 2 atom: N1'
>
> I would like all 4 atoms to be planar.
>
> I found example only for atoms from the same residue.
>
> Can you help me?
>
> Agnieszka
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