[phenixbb] Autobuild iterative omit map error

Terwilliger, Thomas Charles terwilliger at lanl.gov
Fri Feb 20 08:01:40 PST 2015

Hi Emily,
I'm sorry for the trouble!  I'll be happy to try and help with it.  If you send me (off-list) the input files you are using and the full log file I'll have a look.
All the best,
Tom T

On Feb 20, 2015, at 7:53 AM, Emilia C. Arturo (Emily) wrote:

> Hello.
> I'd like to use phenix's Autobuild iterative omit map tool, but have run into an error I could use some help with. When the process aborts, the message that phenix outputs is that the input file has duplicate chains. I looked at the pdb file and I do not see duplicate chains; could the ANISOU records for each atom generated by TLS refinement be hanging up the process? I had no error with Autobuild when I started the iterative map process using an input file that had been generated by phenix.refine using the same configuration as the TLS refinement had used (except, of course, for the TLS parameters).
> Thanks for your attention.
> Emily.
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