[phenixbb] On Ramachandran restraints of Phenix refine

Pavel Afonine pafonine at lbl.gov
Wed Feb 25 09:55:02 PST 2015

Ramachandran plot restraints are rather to preserve good conformations 
from becoming outliers (in cases there is no data to support it or data 
is insufficient) than fix existing outliers.


On 2/24/15 5:58 PM, Smith Lee wrote:
> Dear All,
> If my resolution was between 2.5-3.0 A, and if I did not use Ramachandran restraints in the Phenix refine the Ramachandran outliers would be increased significantly during the  refinement process, in this situation may I use Ramachandran restraints in the Phenix refine?
> I am looking forward to getting your reply.
> Smith
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