[phenixbb] question related to phenix produced PDB file
pafonine at lbl.gov
Sat Mar 21 20:26:26 PDT 2015
this may help:
Acta Cryst. (1995). A51, 880-887
R-Free Likelihood-Based Estimates of Errors for Phases Calculated from
On 3/21/15 7:53 PM, Smith Liu wrote:
> Dear Pavel,
> Is it the degree for the addition of the errors of all the atoms in
> the PDB file? I just think 42.3 degree is a rather large amount,
> either for the whole protein, or for the part of the whole protein?
> For this reason I double the reliability of my refinement. And why
> there is no RMS phase error?
> I am looking forward to getting a reply from you.
> At 2015-03-22 00:16:35, "Pavel Afonine" <pafonine at lbl.gov> wrote:
> Hello Dialing,
> "PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED): 42.3.
> It says "DEGREES".
> On 3/21/15 5:35 AM, Dialing Pretty wrote:
>> Dear All,
>> In my Phenix refine produced PDB file, I find in REMARK 3, there
>> is a sentence "PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED):
>> 42.3. Does 42.3 means 42.3%? Is it too high?
>> I am looking forward to getting your reply.
>> phenixbb mailing list
>> phenixbb at phenix-online.org
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