[phenixbb] Omit map output map files

Manoj saxena mks131 at gmail.com
Sun Nov 15 12:18:55 PST 2015


I would be very grateful if someone can help
me to explain in I can get F0-Fc omit maps of a particular
ligands using Phenix.
I am trying to generate an omit map
for the ligands in my protein model using the
composite omit map GUI feature of phenix version 1.10.1-2155.
I selected my ligands by using atom selection feature under the
map options(and in the omit map method I put refine). What map type I
should give in the map types
input to get the F0-Fc maps. Currently I may getting a map
that look like my 2F0-Fc map that I got after my refinement.
Also, I have no waters in my model.
Can we define areas (boxes) around the ligand to generate
omit map of that particular region to get output  maps with densities
like Fo-Fc maps.

So many thanks in advance.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20151115/b0bfecd6/attachment.htm>

More information about the phenixbb mailing list