[phenixbb] refinement of peptide links in mmcif coordinates (multi character chain identifiers)
Nigel Moriarty
nwmoriarty at lbl.gov
Wed Feb 3 08:29:23 PST 2016
Wolf
Can you send me an example of say three peptides including an AYA?
Cheers
Nigel
---
Nigel W. Moriarty
Building 33R0349, Physical Biosciences Division
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709 Email : NWMoriarty at LBL.gov
Fax : 510-486-5909 Web : CCI.LBL.gov
On Wed, Feb 3, 2016 at 7:59 AM, wtempel <wtempel at gmail.com> wrote:
> Dear PHENIX users,
> for a structure with approx. 30 instances of an N-terminal AYA
> (N-acetylalanyl) residue, I have noticed that PHENIX did not restrain
> planarity of the peptide bond with the next residue. What is the
> recommended way of restraining those peptide bonds' dihedral angles and
> bond distances?
> Thank you,
> Wolfram Tempel
>
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