[phenixbb] Fwd: Generate difference electron density maps for residues with multiple conformations
pafonine at lbl.gov
Thu Feb 18 11:09:44 PST 2016
> I just tried phenix.maps, and it yields substantially different
> difference maps than those obtained through my refinement process.
not surprising at all because phenix.refine changes the model and
phenix.maps uses input model as is to compute maps!
> Are there any other techniques or parameters I can modify to make
> residues with multiple conformations 'invisible' to phenix.refine, in
> addition/besides set occupancies to 0 or deleting the residue form the
> pdb file?
No. They will be always visible to geometry restraints.
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