[phenixbb] Glycan refinement in Phenix.real_space_refine

Pavel Afonine pafonine at lbl.gov
Tue Jul 5 11:47:08 PDT 2016

Hi Simonas,

could you please send me model and map, and tell what ring gets 
distorted. I will investigate this once I have files.

If files are too large to send via email please use one of available 
file sharing tools such as Dropbox.


On 7/5/16 04:07, Simonas Masiulis wrote:
> Hi,
> I want to refine N-linked glycans into an EM density using Phenix.real_space_refine, but it seems the rings get distorted. Does anybody know how to fix this (e.g., is there a way to provide a .cif file)?
> Thanks a lot!
> Simonas

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