[phenixbb] Calculation of bond lengths, angles and torsion angle for large number of proteins
pafonine at lbl.gov
Wed Jan 11 22:40:06 PST 2017
> I would like to calculate all the bond lengths, bond angles and main
> chain torsion angles for a large set of proteins, in PDB format. Could
> you please let me know which module/command in phenix is suitable for
> this task?
phenix.pdb_interpretation model.pdb write_geo_files=true
this will write a file with full list of bond/angle/plane/torsion/etc
definitions for the model you provide.
Let me know if you have any questions.
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