[phenixbb] Error running phenix.rosetta_refine tests with Rosetta 3.8

Nigel Moriarty nwmoriarty at lbl.gov
Mon Mar 20 16:31:03 PDT 2017


We are currently only supporting up to Rosetta 3.7 as a c++11 compiler is
required for any subsequent versions. We have compiled using a c++11
compiler with no problems so I suggest you revert to 3.7 or check the logs
for compilation problems.



Nigel W. Moriarty
Building 33R0349, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709     Email : NWMoriarty at LBL.gov
Fax   : 510-486-5909       Web  : CCI.LBL.gov

On Mon, Mar 20, 2017 at 9:34 AM, Oliver Clarke <olibclarke at gmail.com> wrote:

> Hi,
> Phenix rosetta refinement worked with previous versions of rosetta and
> phenix, but with the latest Rosetta version (3.8) and latest phenix nightly
> I get a crash when running rosetta.run_tests after building the rosetta
> phenix interface, which runs a test run of phenix.rosetta_refine. It gets
> to the stage of generating initial models and then crashes - see attached
> log. Ideas for a fix welcome!
> Cheers
> Oli
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