[phenixbb] Install Phenix 2926 on Linux Fail

[Xiao Lei]

Hi Billy,

Thank you very much information. My version of Ubuntu Mate is 16.04.  I
tried CentOS6 installer, it works fine and problem solved!

On Wed, Oct 18, 2017 at 10:53 AM, Billy Poon <bkpoon at lbl.gov> wrote:

> Hi Xiao,
>
> Can you try using the CentOS 6 installer instead? That is more compatible
> with newer versions of linux. Also, which version of Ubuntu MATE are you
> using? We only test on currently supported LTS versions of Ubuntu (14.04,
> 16.04, and maybe 12.04), which I guess have corresponding versions in
> Ubuntu MATE.
>
> --
> Billy K. Poon
> Research Scientist, Molecular Biophysics and Integrated Bioimaging
> Lawrence Berkeley National Laboratory
> 1 Cyclotron Road
> <https://maps.google.com/?q=1+Cyclotron+Road&entry=gmail&source=g>, M/S
> 33R0345
> Berkeley, CA 94720
> Tel: (510) 486-5709
> Fax: (510) 486-5909
> Web: https://phenix-online.org
>
> On Wed, Oct 18, 2017 at 10:33 AM, Xiao Lei <xiaoleiusc at gmail.com> wrote:
>
>> Dear All,
>>
>> I was trying to install Phenix 2926 on Ubuntu Mate, after type sudo
>> ./install I got the following fail message:
>> =========================================================
>>                           Phenix Installation
>>
>>                           version: dev-2926
>>                      machine type: intel-linux-2.6-x86_64
>>                        OS version: 4.4.0-97-generic
>>                       destination: /usr/local/phenix-dev-2926
>>                   # of processors: 4
>>     ============================================================
>> =============
>>
>> Configuring Phenix components...
>> Traceback (most recent call last):
>>   File "./bin/install.py", line 275, in <module>
>>     installer(sys.argv[1:]).install()
>>   File "/home/linchenlab/Downloads/phenix-installer-dev-2926-intel-
>> linux-2.6-centos5/lib/libtbx/auto_build/install_distribution.py", line
>> 197, in install
>>     self.install_from_binary()
>>   File "/home/linchenlab/Downloads/phenix-installer-dev-2926-intel-
>> linux-2.6-centos5/lib/libtbx/auto_build/install_distribution.py", line
>> 319, in install_from_binary
>>     self.reconfigure(log=log)
>>   File "/home/linchenlab/Downloads/phenix-installer-dev-2926-intel-
>> linux-2.6-centos5/lib/libtbx/auto_build/install_distribution.py", line
>> 379, in reconfigure
>>     call(args=args, log=log, verbose=self.options.verbose)
>>   File "/home/linchenlab/Downloads/phenix-installer-dev-2926-intel-
>> linux-2.6-centos5/lib/libtbx/auto_build/installer_utils.py", line 81, in
>> call
>>     raise RuntimeError("Call to '%s' failed with exit code %d" % (args,
>> rc))
>> RuntimeError: Call to '/usr/local/phenix-dev-2926/base/bin/python
>> /usr/local/phenix-dev-2926/modules/cctbx_project/libtbx/configure.py
>> --current_working_directory /usr/local/phenix-dev-2926/build
>> --command_version_suffix dev-2926 phenix phaser solve_resolve labelit dials
>> xia2 iota prime' failed with exit code 1
>>
>>
>> What I need to do to fix this?
>>
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>>
>
>
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