[phenixbb] refine error message
pafonine at lbl.gov
Mon Sep 18 13:05:53 PDT 2017
The error message says that PDB file contains unknown/nonstandard
residues or ligands. This needs to be addressed before proceeding to
refinement. If you indeed have some unknowns in the model then you need
to provide a proper CIF file with restraints, or resolve the conflict
On 9/18/17 17:57, Jiemin Zhao wrote:
> I got an error message when I try to refine a molecular replacement
> result. It says Fatal problems interpreting model file: Number of
> atoms with unknown nonbonding energy type symbols: 18 Please edit the
> model file to resolve the problems and/or supply a CIF file with
> matching restraint definitions, along with apply-cif-modification and
> apply-cif-link parameter definitions if necessary.
> Could you help me with this problem?
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