[phenixbb] phenix.refine does not work with afitt

Nigel Moriarty nwmoriarty at lbl.gov
Fri Dec 21 08:49:52 PST 2018


AFITT is still supported and tested nightly.

Did you follow the instructions here?

https://www.phenix-online.org/documentation/reference/afitt.html

Cheers

Nigel

---
Nigel W. Moriarty
Building 33R0349, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709     Email : NWMoriarty at LBL.gov
Fax   : 510-486-5909       Web  : CCI.LBL.gov


On Fri, Dec 21, 2018 at 2:55 AM Guenter Fritz <
guenter.fritz.phenix.ccp4 at gmail.com> wrote:

> Dear phenix developers,
>
> I am trying to run phenix.refine with afitt (phenix 1.14 3260, afitt
> 2.4.1.2). However, I receive the an error:
>
> "Sorry: Unknown command line parameter definition: use_afitt = True"
>
> This I get on my mac or on my linux box. Is support for afitt discontinued?
>
> Any help is appreciated. Thanks and best regards,
>
> Guenter
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