[phenixbb] Error very small nonbonded interaction distances.
underoath006 at gmail.com
Wed Aug 21 08:18:51 PDT 2019
Ahh, I had duplicate chains combined together, thanks!
On Wed, Aug 21, 2019 at 1:25 AM Pavel Afonine <pafonine at lbl.gov> wrote:
> Dear Ahmad,
> the error message means exactly what it says: the model contains perfectly
> overlapping atoms, many perfectly overlapping atoms. That isn't very
> realistic and requires your attention! My suggestion is: please have a
> closer look at the model and resolve the outstanding clashes.
> Good luck!
> On 8/20/19 22:17, Ahmad Khalifa wrote:
> I attached the log file below.
> Best regards.
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