[phenixbb] error installation dev-1.14.3405 - 1.14.3409
Guenter Fritz
guenter.fritz.phenix.ccp4 at gmail.com
Tue Feb 12 07:14:29 PST 2019
Dear phenix developers,
I get errors trying to install latest builds from 1.14.3405, 3406, 3409
64bit centos6 on Scientific Linux machines still running 6.6 (kernel
2.6.32).
1.14.3395 installed without any problem.
The downloaded file is OK. 1.14.3409 64bit centos6 installed on Ubuntu
18.04 without any problem.
I also tried to install from source but got the same error output (see
below). I googeled some error outputs - looks like some python error. Do
I have to update finally?
Best regards,
Guenter
Output trying to install from source:
[guenter at msm68 phenix-installer-dev-3409-source]$ ./install
--prefix=/home/software/PHENIX/1.14.3409/ --nproc=10
Traceback (most recent call last):
File "./bin/install.py", line 20, in <module>
from libtbx.auto_build import install_distribution
File
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/install_distribution.py",
line 75, in <module>
from libtbx.auto_build import install_base_packages
File
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/install_base_packages.py",
line 28, in <module>
from .package_defs import *
File
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/package_defs.py",
line 18, in <module>
from .bootstrap import Toolbox
File
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/bootstrap.py",
line 14, in <module>
import argparse
ImportError: No module named argparse
Similar from an installer:
[guenter at msm68
phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6]$ ./install
--prefix=/home/software/PHENIX/1.14.3405/
Traceback (most recent call last):
File "./bin/install.py", line 20, in <module>
from libtbx.auto_build import install_distribution
File
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_distribution.py",
line 75, in <module>
from libtbx.auto_build import install_base_packages
File
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_base_packages.py",
line 28, in <module>
from .package_defs import *
File
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/package_defs.py",
line 18, in <module>
from .bootstrap import Toolbox
File
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/bootstrap.py",
line 14, in <module>
import argparse
ImportError: No module named argparse
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