[phenixbb] Rosetta cannot Rebuild

[Nigel Moriarty]

Kay

I would upgrade to Rosetta 3.10 and Phenix 1.15.2 and retry.

Cheers

Nigel

---
Nigel W. Moriarty
Building 33R0349, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709     Email : NWMoriarty at LBL.gov
Fax   : 510-486-5909       Web  : CCI.LBL.gov


On Wed, May 8, 2019 at 9:08 AM Perry, Kay H. <kperry at anl.gov> wrote:

> I am having a problem with mr_rosetta where I cannot make it past the
> rebuild step.  I have made fragment files using the old Robetta Server and
> I am using a hhpred alignment file, but even if I try with a
> model_already_placed when I reach rebuilding, I get the following error.
>
> protocols.looprelax: ===
> protocols.looprelax: ===   Remodel
> protocols.looprelax: ===
>
> ERROR: frag_libs().size() > 0
> ERROR:: Exit from: src/protocols/comparative_modeling/LoopRelaxMover.cc
> line: 47
> 7
>
>  My PHENIX_ROSETTA_PATH is pointed at
> /share/apps/necat/programs/rosetta3.4 so I believe I am using version 3.4
> of rosetta.
>
>
> Kay Perry
> NE-CAT
> 9700 S. Cass Ave.
> Bldg. 436 E007
> Argonne, IL 60439
> 630-252-0692
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://phenix-online.org/mailman/listinfo/phenixbb
> Unsubscribe: phenixbb-leave at phenix-online.org
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20190509/1f6259a1/attachment.htm>