[phenixbb] Differences in refinement statistics

Pavel Afonine pafonine at lbl.gov
Mon Nov 18 15:23:16 PST 2019

Hi Chancievan,

comparing the two files you attached I see you are looking at two 
different model and map files. Is this the case?

If you are comparing two different Phenix versions at least you need to 
use the exact same inputs, otherwise your comparisons aren't going to be 


On 11/17/19 04:48, Chancievan Thangaratnarajah wrote:
> Hello,
> I have noticed differences in the refinement statistics between two different Phenix versions (see attachments) even though I am using the same cryo-EM map and model as input. The most notable difference are rotamer outliers, which were 0 % in Phenix 1.16-3549 and now 6 % in Phenix 1.17-3660. I was wondering whether anyone has noticed a similar behaviour? Or is there something that I have missed?
> Best,
> Chancie.

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