[phenixbb] Calculating the transformation matrix of density map alignment

[Paul Emsley]

On 20/12/2020 21:33, Ahmad Khalifa wrote:
> I have two density maps that I'm trying to align, or more precisely, 
> calculate the transformation matrix (rotation and translation) of 
> their alignment (moving one map and aligning it with the other map). 
> Is there a way to accomplish that using phenix or any other tool?


This sounds like one of the tasks that can be performed with EMDA

https://www.ccpem.ac.uk/training/icknield_2019/correlation_validation_cryoem.pdf

https://gitlab.com/ccpem/emda/-/tree/master/docs