[phenixbb] Bond angle outliers missing from the list

Andrew Alexander andrew.alexander2010 at gmail.com
Sat Oct 22 23:54:49 PDT 2022


Dear All,

Was the cause and solution of this problem identified? I have also seen
this problem with both Phenix v1.20.1-4487 and dev-4742.

Many thanks,
Andrew
ᐧ

On Sun, 16 Oct 2022 at 02:49, Pavel Afonine <pafonine at lbl.gov> wrote:

> Hi Adrian,
>
> could you please send me the PDB file (off mailing list, to me directly)
> for investigation?
>
> Thanks!
> Pavel
> On 10/14/22 01:30, Adrián González López wrote:
>
> Hi!
>
> I performed a real space refinement on my EM map and my validation summary
> indicates that I have 17 bond angle outliers. However, when I check on the
> MolProbity tab, Geometry Restraints, it only shows me one of them (and it
> still says there are 17). Is this a bug or something else?
> You can see it on the screenshot below:
>
> Thanks!
>
> /Adrian
>
>
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