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<DIV><FONT face=Arial size=2>Hi,</FONT></DIV>
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<DIV><FONT face=Arial size=2>Quick question. I am trying to refine
occupancy of a ligand and was attempting to do this using the method outlined
under the CCI Apps documentation for phenix.refine. </FONT></DIV>
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<P class=first>Refinement of one occupancy factor per selected group of atoms
(group occupancy refinement):</P><PRE class=literal-block>% phenix.refine data.hkl model.pdb strategy=group_occupancies \
refine.occupancies.group="chain A and resid 1"</PRE></LI></DIV>
<DIV><FONT face=Arial size=2>Yet, when I type the commands, I keep getting an
error saying that something is wrong with my commands: strategy, group,
etc. I have not (at least I don't recall) loading the updated CCI Apps and
only have what was installed with Phenix 1.24b installation. </FONT></DIV>
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<DIV><FONT face=Arial size=2>Am I doing something wrong here or do I need to
update the CCI Apps?</FONT></DIV>
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<DIV><FONT face=Arial size=2>Thanks in advance for all feedback!</FONT></DIV>
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<DIV><FONT face=Arial size=2>Cheers,</FONT></DIV>
<DIV><FONT face=Arial size=2>Nick</FONT></DIV>
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size=2>________________________________________</FONT></DIV>
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<DIV><FONT face=Arial size=2>Nicholas Noinaj<BR>University of Kentucky School of
Medicine<BR>Department of Molecular and Cellular Biochemistry<BR>Biomedical
Biological Sciences Research Building, Rm 236<BR>741 S. Limestone<BR>Lexington,
Ky 40536<BR>Lab: 859-323-8183<BR>Home: 859-228-0978<BR><A
href="mailto:noinaj@uky.edu">noinaj@uky.edu</A><BR><A
href="http://www.noinaj.com">www.noinaj.com</A></FONT></DIV>
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