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<br>Hallo!<br><br>Sorry for the probably easy question.<br><br>I'm trying to rebuild a model with Autobuild. The protein has a ligand, whose density is already well defined, thus that the input for the new autobuild run includes its coordinates as well. <br><br>When I start the autobuild run, however, I see that the ligand is removed before rebuilding, which leads the program to use the ligand density to try to rebuild loops, thus introducing errors.<br><br>How can I keep the ligand in place, please? Or is there any alternative solutions?<br><br>Many thanks,<br><br>Claudia <br><br><br><br><br>Claudia Scotti <br>Dipartimento di Medicina Sperimentale <br>Sezione di Patologia Generale <br>Universita' di Pavia <br>Via Ferrata, 1<br>27100 Pavia <br>Italia <br>Tel. 0039 0382 986335/8/1 <br>Facs 0039 0382 303673<br><br> <br /><hr />Hotmail: Free, trusted and rich email service. <a href='https://signup.live.com/signup.aspx?id=60969' target='_new'>Get it now.</a></body>
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