<div dir="ltr">Hi Yangqi,<div>You can use phenix.map_box with the extract_unique=true option and supplying the helical symmetry to get the unique part of the map. Let me know if that doesn't do it for you!</div><div>All the best,</div><div>Tom T</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Thu, Mar 21, 2019 at 2:24 PM Yangqi Gu <<a href="mailto:yangqi.gu@yale.edu">yangqi.gu@yale.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Hi Everyone, <div>I have a naive question about segmentation. I have a low resolution map of a filament (~20 A) and I know the helical symmetry. I have monomer sequence but no structure. I am wondering if I could segment the filament and obtain the monomer density? Does <span style="color:rgb(0,0,0);font-family:Verdana,Helvetica,Arial,sans-serif;font-size:14.4px">segment_and_split_map</span> work on the low resolution case?</div><div>Best,</div><div>Yangqi</div><div><div><br></div>-- <br><div dir="ltr" class="gmail-m_-4362015963681048568gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><br></div>Yangqi Gu<div>Graduate Student</div><div>Malvankar Lab</div><div>Yale University, West Campus</div></div></div></div></div></div></div>
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Unsubscribe: <a href="mailto:phenixbb-leave@phenix-online.org" target="_blank">phenixbb-leave@phenix-online.org</a></blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr" class="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div dir="ltr">Thomas C Terwilliger<div>Laboratory Fellow, Los Alamos National Laboratory</div><div>Senior Scientist, New Mexico Consortium</div><div>100 Entrada Dr, Los Alamos, NM 87544</div><div>Email: <a href="mailto:tterwilliger@newmexicoconsortium.org" target="_blank">tterwilliger@newmexicoconsortium.org</a></div><div>Tel: 505-431-0033</div><div><br></div></div></div></div></div></div></div></div>