<div dir="ltr"><div dir="ltr">Guenter</div><div class="gmail_quote"><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div>
<p>I cannot get the Amber and AFITT menu bars in the phenix.refine
GUI on a Ubuntu (Xubuntu 18.04) box. <br></p></div></blockquote><div>Do you have AFITT installed and setup following <a href="https://www.phenix-online.org/documentation/reference/afitt.html">https://www.phenix-online.org/documentation/reference/afitt.html</a></div><div><br></div><div>Regarding Amber, Ubuntu is the problem child for many things including Phenix-Amber. I'm hoping Billy can help here.</div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div><p>
</p>
<p> I set Preferences "Enable alpha-test programs and features"
(works on my Mac 10.14.6 and SciLinux6 box ).<br></p></div></blockquote><div>Don't think this matters for Amber anymore as it's distributed with Phenix. </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div><p>
</p>
<p><br>
</p>
<p>Moreover, on the Xubuntu machine: when I start the phenix.refine
GUI (phenix version 1.18.2-3874) I see the following error message
in the terminal running phenix:</p>
<p><i><i>$ phenix</i></i></p>
<p><i>Could not import the compiled Python-sander interface. Make
sure you have the Python development libraries installed and
that you have sourced amber.sh or amber.csh <br></i></p></div></blockquote><div>Does it crash? Billy probably has the answers here.</div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div><p><i>
</i></p>
<p><br>
<i><i>------------------------</i></i></p>
<p>python 3.7 is installed and python development tools :<i><br>
</i></p>
<p><i>------------------------<br>
</i></p>
<p><i>$ python -V
</i><i><br>
</i><i>Python 3.7.6 </i></p>
<p><i>$ sudo apt list -a python3.7-dev
</i><i><br>
</i><i>Listing... Done
</i><i><br>
</i><i>python3.7-dev/bionic-updates,now 3.7.5-2~18.04 amd64
[installed]
</i><i><br>
</i><i>python3.7-dev/bionic-security 3.7.3-2~18.04.1 amd64
</i><i><br>
</i><i>python3.7-dev/bionic 3.7.0~b3-1 amd64 <br>
</i></p>
<p><i>------------------------</i></p></div></blockquote><div>Phenix 1.18.2 should be the last major release to use Python2 so you need to have it available.</div><div><br></div><div>Nigel <br></div></div></div>