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<div dir="auto">Dear all,<br />
<br />
I have a question regarding phenix.mr_rosetta. I manually build a model in Coot, and want to use phenix.mr_rosetta to prerefine the model. I followed the instruction on <a href="https://phenix-online.org/documentation/reference/mr_rosetta.html#rebuilding-your-model-with-rosetta-before-mr" target="_blank">https://phenix-online.org/documentation/reference/mr_rosetta.html#rebuilding-your-model-with-rosetta-before-mr</a>. <br />
<br />
Basically, my scenario is like what’s written in NOTE 2: “have a model and just want to run pre-refinement and not anything else”. I noticed that if I put nproc=xx, then the job would eventually output no structures. I checked each subjob and found that they all failed. I suspect this behavior was caused by files overwritten by parallel jobs. When I don’t specify nproc, then there’s no problem. However, in this case, for number_of_prerefine_models=1000, it would take a very long time. <br />
<br />
I hope I described the behavior clearly. Is there a way of running the prerefine jobs in parallel?<br />
<br />
Thanks,<br />
<br />
Wei</div>
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